PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08686
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 291aa    MW: 30953.5 Da    PI: 7.892
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08686genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.81.6e-26122182158
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               ldDg++WrKYGqK++ g+++pr+Y+rCt++   gC + k+v+r++ dp +++++Y+g+H++
  EMT08686 122 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCYASKQVQRAHGDPLLFDVVYHGNHTC 182
               59***************************98999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-27109182IPR003657WRKY domain
SuperFamilySSF1182901.57E-24116182IPR003657WRKY domain
PROSITE profilePS5081121.482117180IPR003657WRKY domain
SMARTSM007742.5E-37122184IPR003657WRKY domain
PfamPF031068.0E-25123182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEERCALATE LAQVLDTVRQ LEAHMGVKGG ADGGETCRAL VSSMRSSVDR SIHIAMSSCC  60
VVLGAPESPP SAGGSPRSGG SDQAADSPCR GAHAAGQSKK RKTQPKWSTQ VRVNSVEDVG  120
PLDDGFSWRK YGQKDILGAK YPRAYFRCTH RHTQGCYASK QVQRAHGDPL LFDVVYHGNH  180
TCVRGKHCTR QTPQPAASGE HRQPQPAGGQ ERVSVGQKTD GGVAAPFSFP SKQAGADTGS  240
DFQAGCATTA SPFMSPATSE CKASTTESPM GDMDFMLQLA DADFLDNSRY L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-13113181873Probable WRKY transcription factor 4
2lex_A1e-13113181873Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274010.0KR827401.1 Triticum aestivum WRKY50 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566949.11e-121PREDICTED: probable WRKY transcription factor 53
TrEMBLM8B3Y90.0M8B3Y9_AEGTA; Putative WRKY transcription factor 53
STRINGMLOC_44455.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.27e-38WRKY family protein